A list compiled elsewhere. I thought it would be helpful for any collectors here.

Feel free to point out errors or suggest any additions we missed.

List of Super-Hero/Comic Book Games on Consoles & Handhelds

Consoles

Atari 2600:
1. Masters of the Universe: The Power of He-Man (1983)
2. Spider-Man (1982)
3. Superman (Atari) (1979)

Commodore 64:
1. The Amazing Spider-Man (1990)
2. The Amazing Spider-Man and Captain America in Dr. Doom's Revenge! (1989)
3. Batman (Ocean) (1989)
4. Batman: The Caped Crusader (1988)
5. Captain America in The Doom Tube of Dr. Megalomann
6. Dick Tracy
7. The Hulk: Questprobe (1984)
8. Masters of the Universe: The Ilearth Stone (1987)
9. Superman: The Game (First Star Software) (1985)
10. Teenage Mutant Ninja Turtles (1989)
11. X-Men: Madness In Murderworld (1989)

Dreamcast:
1. Marvel vs. Capcom: Clash of the Super Heroes
2. Marvel vs. Capcom 2
3. Spawn: In the Demon's Hand (2000)
4. Spider-Man (2000)

GameCube:
1. Aquaman: Battle For Atlantis
2. Batman Begins
3. Batman: Dark Tomorrow
4. Batman: Rise of Sin Tsu
5. Batman: Vengeance
6. Catwoman
7. Fantastic 4 (2005)
8. Hulk (2003)
9. The Incredible Hulk: Ultimate Destruction (2005)
10. Marvel Nemesis: Rise of the Imperfects
11. Spawn: Armageddom
12. Spider-Man: The Movie (2002)
13. Spider-Man 2 (2004)
14. Superman: Shadow of Apokolips
15. Teen Titans
16. Teenage Mutant Ninja Turtles (2003)
17. Teenage Mutant Ninja Turtles 2: Battle Nexus (2004)
18. Teenage Mutant Ninja Turtles 3: Mutant Nightmare (2005)
19. Teenage Mutant Ninja Turtles: Mutant Melee
20. TMNT (2007)
21. Turok: Evolution
22. X2: Wolverine's Revenge
23. X-Men Legends
24. X-Men Legends II: Rise of Apocalypse

Genesis:
1. The Adventures of Batman and Robin (1995)
2. Batman: The Video Game (1990)
3. Batman: Revenge of the Joker
4. Batman Returns
5. Batman Forever
6. Captain America and The Avengers
7. Comix Zone
8. Dick Tracy
9. The Death and Return of Superman (Sunsoft) (1995)
10. Ex-Mutants
11. The Incredible Hulk (1994)
12. Judge Dredd
13. Justice League: Task Force
14. Maximum Carnage (Spider-Man & Venom)
15. Phantom 2040
16. The Punisher (Capcom) (1993)
17. Seperation Anxiety (Spider-Man & Venom)
18. Spider-Man (1991)
19. Spider-Man/X-Men: Arcade's Revenge
20. Spider-Man: The Animated Series (1995)
21. Superman (Sunsoft) (1992)
22. Teenage Mutant Ninja Turtles: The Hyperstone Heist (1992)
23. Teenage Mutant Ninja Turtles: Tournament Fighters
24. Wolverine: Adamantium Rage (1994)
25. X-Men (Sega) (1993)
26. X-Men 2: The Clone Wars

Intellivision:
1. Masters of the Universe: The Power of He-Man (1983)

Master System:
1. Batman Returns
2. Dick Tracy
3. The Flash (1993)
4. Spider-Man: Return of the Sinister Six (1992)
5. Spider-Man (1991)
6. Superman: The Man of Steel (Virgin Interactive) (1993)
7. X-Men: Mojo World (Sega) (1996)

N64:
1. Batman Beyond: Return of The Joker
2. Spider-Man (2000)
3. Superman (a.k.a. "Superman 64") (Titus Software) (1999)
4. Turok: Dinosaur Hunter
5. Turok 2: Seeds of Evil
6. Turok 3: Shadow of Oblivion
7. Turok: Rage Wars

NES:
1. Batman: The Video Game (1990)
2. Batman: Return of The Joker
3. Batman Returns
4. Captain America and The Avengers
5. Captain Planet and The Planeteers
6. Darkwing Duck
7. Dick Tracy
8. Nightshade
9. The Punisher (LJN) (1990)
10. Silver Surfer
11. Spider-Man: Return of The Sinister Six (1992)
12. Superman (Kemco) (1988)
13. Swamp Thing
14. Teenage Mutant Ninja Turtles (1989)
15. Teenage Mutant Ninja Turtles II: The Arcade Game (1990)
16. Teenage Mutant Ninja Turtles III: The Manhattan Project (1992)
17. Teenage Mutant Ninja Turtles: Tournament Fighters
18. The Uncanny X-Men (LJN) (1989)
19. Wolverine (1991)
20. Zen: The Intergalactic Ninja

PS1:
1. Batman Forever: The Arcade Game
2. Batman: Gotham City Racer
3. Batman & Robin
4. Batman Beyond: Return of The Joker
5. Blade
6. The Crow: City of Angels
7. Danger Girl
8. Fantastic Four (1997)
9. Hellboy: Asylum Seeker (2004)
10. The Incredible Hulk: Pantheon Saga (1996)
11. Iron Man/X-O Manowar in Heavy Metal
12. Marvel Super Heroes
13. Marvel Super Heroes vs. Street Fighter
14. Marvel vs. Capcom: Clash of the Super Heroes
15. Spawn: The Eternal (1997)
16. Spider-Man (2000)
17. Spider-Man 2: Enter Electro (2001)
18. X-Men: Children of the Atom
19. X-Men: Mutant Academy
20. X-Men: Mutant Academy 2
21. X-Men vs. Street Fighter


PS2:
1. Batman Begins
2. Batman: Dark Tomorrow
3. Batman: Rise of Sin Tzu
4. Batman: Vengeance
5. Blade II
6. Catwoman
7. Constantine
8. Fantastic 4 (2005)
9. Fantastic Four: Rise of The Silver Surfer
10. Ghost Rider
11. Hulk (2003)
12. The Incredible Hulk: Ultimate Destruction (2005)
13. Iron Man
14. Justice League: Heroes
15. Lego Batman: The Video Game
16. Marvel Nemesis: Rise of the Imperfects
17. Marvel Super Hero Squad
18. Marvel: Ultimate Alliance
19. Marvel: Ultimate Alliance 2
20. Marvel vs. Capcom 2
21. The Punisher (2005)
22. Spawn: Armageddon
23. Spider-Man: The Movie (2002)
24. Spider-Man 2 (2004)
25. Spider-Man 3
26. Spider-Man: Friend or Foe
27. Superman: Shadow of Apokolips
28. Superman Returns
29. Teen Titans
30. Teenage Mutant Ninja Turtles (2003)
31. Teenage Mutant Ninja Turtles 2: Battle Nexus (2004)
32. Teenage Mutant Ninja Turtles 3: Mutant Nightmare (2005)
33. Teenage Mutant Ninja Turtles: Mutant Melee
34. Teenage Mutant Ninja Turtles: Smash-Up
35. TMNT (2007)
36. Turok: Evolution
37. Ultimate Spider-Man
38. X-Men: The Official Game (2006)
39. X-Men Legends
40. X-Men Legends II: Rise of Apocalypse
41. X-Men: Next Dimension
42. X-Men Origins: Wolverine
43. X2: Wolverine's Revenge

PS3:
1. The Amazing Spider-Man (2012)
2. Batman: Arkham Asylum
3. Batman: Arkham City
4. Batman: Arkham Origins
5. Captain America: Super Soldier
6. The Darkness
7. The Darkness 2
8. Deadpool
9. DC Universe: Online
10. Green Lantern: Rise of The Manhunters
11. Hellboy: The Science of Evil
12. The Incredible Hulk (2008)
13. Injustice: Gods Among Us
14. Iron Man
15. Iron Man 2
16. Lego Batman: The Video Gam
17. Lego Batman 2: DC Super Heroes
18. Lego: Marvel Super Heroes
19. Marvel Super Hero Squad: The Infinity Gauntlet
20. Marvel Super Hero Squad: Comic Combat (UDraw)
21. Marvel: Ultimate Alliance
22. Marvel: Ultimate Alliance 2
23. Marvel vs. Capcom: Clash of the Super Heroes (PSN)
24. Marvel vs. Capcom 2 (PSN)
25. Marvel vs. Capcom 3
26. Mortal Kombat vs. DC Universe
27. The Punisher: No Mercy
28. Spider-Man 3
29. Spider-Man: Edge of Time
30. Spider-Man: Shattered Dimensions
31. Spider-Man: Web of Shadows
32. Teenage Mutant Ninja Turtles: The Arcade Game (PSN)
33. Teenage Mutant Ninja Turtles: Turtles In Time: Reshelled (PSN)
34. Thor
35. Ultimate Marvel vs. Capcom 3
36. X-Men: The Arcade Game (PSN)
37. X-Men: Destiny
38. X-Men Origins: Wolverine
39. Young Justice: Legacy

PS4:
1. Injustice: Gods Among Us: Ultimate Edition
2. Lego: Marvel Super Heroes

Saturn:
1. Batman Forever: The Arcade Game
2. The Crow: City of Angels
3. Iron Man/X-O Manowar in Heavy Metal
4. The Incredible Hulk: Pantheon Saga (1996)
5. Marvel Super Heroes
6. Marvel Super Heroes vs. Street Fighter
7. Scud: The Disposable Assassin
8. X-Men: Children of the Atom
9. X-Men vs. Street Fighter

Sega 32X:
1. Spider-Man: Web of Fire

Sega CD:
1. The Adventures of Batman & Robin (1995)
2. The Amazing Spider-Man vs. The Kingpin (Upgraded version of "Spider-Man (1991)")
3. Batman Returns
4. Ultraverse: Prime

SNES:
1. The Adventures of Batman and Robin (Konami) (1994)
2. Batman Returns
3. Batman Forever
4. Captain America and The Avengers
5. The Death and Return of Superman (Sunsoft) (1994)
6. The Incredible Hulk (1994)
7. Judge Dredd
8. Justice League: Task Force
9. Phantom 2040
10. Marvel Super Heroes: War of the Gems
11. Maximum Carnage (Spider-Man & Venom)
12. Seperation Anxiety (Spider-Man & Venom)
13. Spawn: The Video Game (1995)
14. Spider-Man: The Animated Series (1995)
15. Spider-Man/X-Men: Arcade's Revenge
16. Teenage Mutant Ninja Turtles IV: Turtles From Time (1992)
17. Teenage Mutant Ninja Turtles: Tournament Fighters
18. WildC.A.T.s: Covert Action Teams
19. Wolverine: Adamantium Rage (Acclaim) (1994)
20. X-Men: Mutant Apocalypse (Capcom) (1994)

TurboGrafx-16:
1. Batman (Sunsoft) (1990)
2. Darkwing Duck

Wii:
1. The Amazing Spider-Man (2012)
2. Batman: The Brave and the Bold
3. Captain America: Super Soldier
4. The Incredible Hulk (2008)
5. Lego Batman: The Video Game
6. Lego Batman 2: DC Super Heroes
7. Marvel Super Hero Squad
8. Marvel Super Hero Squad: The Infinity Gauntlet
9. Marvel Super Hero Squad: Comic Combat (UDraw)
10. Marvel: Ultimate Alliance
11. Marvel: Ultimate Alliance 2
12. Spider-Man 3
13. Spider-Man: Edge of Time
14. Spider-Man: Friend or Foe
15. Spider-Man: Shattered Dimensions
16. Spider-Man: Web of Shadows
17. Thor
18. Teenage Mutant Ninja Turtles: Smash-Up
19. TMNT (2007)
20. Teenage Mutant Ninja Turtles (Nickelodeon) (2013)
21. X-Men: Destiny
22. X-Men Origins: Wolverine

Wii U:
1. The Amazing Spider-Man (2012)
2. Avengers: Battle For Earth
3. Batman: Arkham City: Armored Edition
4. Batman: Arkham Origins
5. Injustice: Gods Among Us
6. Lego Batman 2: DC Super Heroes
7. Lego: Marvel Super Heroes
8. Scribblenauts: Unmasked

XBox (Original):
1. Aquaman: Battle For Atlantis
2. Batman Begins
3. Batman: Dark Tomorrow
4. Batman: Rise of Sin Tzu
5. Batman: Vengeance
6. Blade II
7. Catwoman
8. Constantine
9. Fantastic 4 (2005)
10. Hulk (2003)
11. The Incredible Hulk: Ultimate Destruction (2005)
12. Justice League: Heroes
13. Marvel Nemesis: Rise of the Imperfects
14. Marvel: Ultimate Alliance
15. Marvel vs. Capcom 2
16. The Punisher (2005)
17. Soul Calibur II (Spawn XBox exclusive playable character)
18. Spawn: Armageddon
19. Spider-Man: The Movie (2002)
20. Spider-Man 2 (2004)
21. Superman: The Man of Steel
22. Superman Returns
23. Teen Titans
24. Teenage Mutant Ninja Turtles (2003)
25. Teenage Mutant Ninja Turtles 2: Battle Nexus (2004)
26. Teenage Mutant Ninja Turtles 3: Mutant Nightmare (2005)
27. Teenage Mutant Ninja Turtles: Mutant Melee
28. Turok: Evolution
29. Ultimate Spider-Man
30. X-Men: The Official Game (2006)
31. X-Men Legends
32. X-Men Legends II: Rise of Apocalypse
33. X-Men: Next Dimension
34. X2: Wolverine's Revenge

Xbox 360:
1. The Amazing Spider-Man (2012)
2. Avengers: Battle For Earth
3. Batman: Arkham Asylum
4. Batman: Arkham City
5. Batman: Arkham Origins
6. Captain America: Super Soldier
7. The Darkness
8. The Darkness 2
9. Deadpool
10. Fantastic Four: Rise of The Silver Surfer
11. Ghost Rider
12. Green Lantern: Rise of the Manhunters
13. Hellboy: The Science of Evil (2008)
14. The Incredible Hulk (2008)
15. Injustice: Gods Among Us
16. Iron Man
17. Iron Man 2
18. Lego Batman: The Video Game
19. Lego Batman 2: DC Super Heroes
20. Lego: Marvel Super Heroes
21. Marvel Super Hero Squad: The Infinity Gauntlet
22. Marvel: Ultimate Alliance
23. Marvel: Ultimate Alliance: Gold Edition
24. Marvel: Ultimate Alliance 2
25. Marvel vs. Capcom: Clash of the Super Heroes (Xbox Live Arcade)
26. Marvel vs. Capcom 2 (Xbox Live Arcade)
27. Marvel vs. Capcom 3
28. Mortal Kombat vs. DC Universe
29. Spider-Man 3
30. Spider-Man: Edge of Time
31. Spider-Man: Friend or Foe
32. Spider-Man: Shattered Dimensions
33. Spider-Man: Web of Shadows
34. Superman Returns
35. Thor
36. TMNT (2007)
37. Teenage Mutant Ninja Turtles (Nickelodeon) (2013)
38. Teenage Mutant Ninja Turtles: The Arcade Game (Xbox Live Arcade)
39. Teenage Mutant Ninja Turtles: Turtles In Time: Reshelled (Xbox Live Arcade)
40. Turok
41. Ultimate Marvel vs. Capcom 3
42. X-Men: The Arcade Game (Xbox Live Arcade)
43. X-Men: The Official Game (2006)
44. X-Men: Destiny
45. X-Men Origins: Wolverine: Uncaged Edition
46. Young Justice: Legacy

XBox One:
1. Lego: Marvel Super Heroes



Handhelds

Game Boy (Original):
1. The Amazing Spider-Man (1990)
2. The Amazing Spider-Man 2 (1992)
3. Batman: The Video Game (1990)
4. Batman: Return of The Joker
5. Batman: The Animated Series (1993)
6. Darkwing Duck
7. Dick Tracy
8. Judge Dredd
9. The Punisher: The Ultimate Payback (LJN) (1991)
10. Spider-Man/X-Men: Arcade's Revenge
11. Superman
12. Swamp Thing
13. Teenage Mutant Ninja Turtles: Fall of the Foot Clan (1991)
14. Teenage Mutant Ninja Turtles II: Back From the Sewers (1992)
15. Teenage Mutant Ninja Turtles III: Radical Rescue (1993)
16. Zen: The Intergalactic Ninja

GBC:
1. Batman: Chaos In Gotham
2. Batman Beyond: Return of the Joker
3. Spider-Man (2000)
4. Spider-Man 2: The Sinister Six (2001)
5. X-Men: Mutant Academy
6. X-Men: Mutant Wars
7. X-Men: Wolverine's Rage

GBA:
1. Batman Begins
2. Batman: Vengeance
3. Catwoman
4. Daredevil
5. Ghost Rider
6. The Invincible Iron Man
7. Justice League Chronicles
8. Justice League Heroes: The Flash (2006)
9. Justice League: Injustice For All
10. Marvel: Ultimate Alliance
11. Masters of the Universe: The Power of Grayskull (2002)
12. Spider-Man: Mysterio's Menace (2001)
13. Spider-Man 2 (2004)
14. Spider-Man 3
15. Superman: Countdown to Apokolips
16. Teen Titans
17. Teen Titans 2
18. Teenage Mutant Ninja Turtles (2003)
19. Teenage Mutant Ninja Turtles 2: Battle Nexus (2004)
20. TMNT
21. Ultimate Spider-Man
22. X-Men: The Official Game (2006)
23. X-Men: Reign of Apocalypse (2001)
24. X2: Wolverine's Revenge

Nintendo DS:
1. The Amazing Spider-Man (2012)
2. Batman: The Brave and the Bold
3. Captain America: Super Soldier
4. Green Lantern: Rise of The Manhunters
5. The Incredible Hulk
6. Iron Man
7. Lego Batman: The Video Game
8. Lego Batman 2: DC Super Heroes
9. Marvel Nemesis: Rise of the Imperfects
10. Marvel Super Hero Squad
11. Marvel Super Hero Squad: The Infinity Gauntlet
12. Marvel Trading Card Game
13. Marvel: Ultimate Alliance 2
14. Spider-Man 3
15. Spider-Man: Battle For New York
16. Spider-Man: Friend or Foe
17. Spider-Man: Shattered Dimensions
18. Ultimate Spider-Man
19. Spider-Man: Web of Shadows
20. Teenage Mutant Ninja Turtles 3: Mutant Nightmare (2005)
21. TMNT (2007)
22. X-Men: Destiny
23. X-Men Origins: Wolverine

3DS:
1. The Amazing Spider-Man (2012)
2. Batman: Arkham Origins: Blackgate
3. Lego Batman 2: DC Super Heroes
4. Lego: Marvel Super Heroes
5. Marvel Super Hero Squad: The Infinity Gauntlet 3D
6. Scribblenauts: Unmasked
7. Spider-Man: Edge of Time
8. Teenage Mutant Ninja Turtles (Nickelodeon) (2013)
9. Young Justice: Legacy

Atari Lynx:
1. Batman Returns

Game Gear:
1. The Adventures of Batman and Robin (1995)
2. Batman Returns
3. Batman Forever
4. Captain America and The Avengers
5. Iron Man/X-O Manowar in Heavy Metal
6. Judge Dredd
7. Phantom 2040
8. Spider-Man (1991)
9. Spider-Man: Return of the Sinister Six (1993)
10. Spider-Man/X-Men: Arcade's Revenge
11. Superman: The Man of Steel (Virgin Interactive) (1993)
12. X-Men (Sega) (1994)
13. X-Men: Gamemaster's Legacy (Sega) (1995)

PSP:
1. Hellboy: The Science of Evil
2. Iron Man
3. Iron Man 2
4. Justice League: Heroes
5. Lego Batman: The Video Game
6. Marvel Nemesis: Rise of The Imperfects
7. Marvel Super Hero Squad
8. Marvel: Ultimate Alliance
9. Spider-Man: The Movie (2002)
10. Spider-Man 2 (2004)
11. Spider-Man 3
12. Spider-Man: Friend or Foe
13. Spider-Man: Web of Shadows
14. TMNT (2007)
15. X-Men Legends II: Rise of Apocalypse
16. X-Men Origins: Wolverine

PS Vita:
1. The Amazing Spider-Man (2012)
2. Batman: Arkham Origins: Blackgate
3. Injustice: Gods Among Us
4. Lego Batman 2: DC Super Heroes
5. Lego: Marvel Super Heroes
6. Ultimate Marvel vs. Capcom 3

N-Gage:
1. Spider-Man 2
2. X-Men Legends
3. X-Men Legends II: Rise of Apocalypse

How did NES Darkwing Duck get on there?

The conditions for the list was comic book-based or super hero games. And it was argued that Darkwing Duck is a super-hero, even if it is done by Disney.

Nightshade on NES was another questionable one, I thought, since it has no tie to any actual existing comic book. And I thought Masters of the Universe didn't belong because it was a cartoon before it was a comic book. But again, the super hero card was used.

well with that logic 90% of video games would be on your list

90% of video games are about super-heroes?

BATMAN: VENGEANCE on GameCube was awesome! Loved that game.

90% of console video games have a hero in them able to incredible feats but, 90% is probably way off there is alot more sports and fps out now. which i really didn't think about before i threw out that 90%

but if your going to count darkwing duck and he man why isn't mario, metroid, mega man etc.. not included. they all have some sort of special super power or skill or costume with gadgets.

I have just a handful of superhero video games right now...

Batman (NES)
Batman (Genesis)
X-Men (Genesis)
Spiderman (1991, Genesis)
Spiderman (1994, Genesis)
Incredible Hulk (Genesis)
Ghost Rider (PS2)
Arkham Asylum (PS3)
Arkham City (PS3)
Green Lantern (PS3)

Like I said, I wouldn't have included them. It was a group effort.

However Darkwing Duck is obviously an archetype of Batman, it's far different than Mario or Metroid.

Maybe I'm wrong, cause I'm not a Masters Of The Universe fan, but didn't He-Man's comic book appearance pre date the cartoon and toy line?

I guess you're right. Just looked it up, and Wikipedia supports that. I would have bet money the cartoon was first. Comic was in 1982, cartoon the following year.

So I suppose I have to now begrudgingly agree with the others guys that MOTU does belong.

Just wanted to put in my two cents here. Darkwing Duck was a comic book before it was a cartoon show? I actually kinda hate seeing him listed as a comic book based video game, myself. I'll deal with it tho.

All the original Action Figures came with mini-comics (01/82) and DC Presents 47 (7/82) is the 1st appearance in mainstream comics before MOTU 1 (12/82)

What?! No Dinosaurs For Hire on the Sega Genesis?

Thats quite a list. Dick Tracy for the NES and The Adventures of Batman & Robin for the SNES are 2 of my favorites. In fact, I still play the Dick Tracy ROM on my computer here and there.. its alot harder then I remember.

Is that for real? I love Dinosaurs For Hire! Was there really a Sega Genesis game?

Yep It's Real - Link